[Pffft] I suppose that's one way to look at it...either way, after we met them, those Pokemon went back to their own time and Team Rocket had been successfully defeated and chased away from the mountain. So, everything since then has had a normal flavor to it, at least from what I can recall.

[Or rather, "from Cilan's current canon point", anyway. He hasn't been updated on TR's next plan involving Meloetta and all that stuff that happened, or the stuff with Team Plasma, so...yeah, as far as he knows, things are alright at the moment.]